Statistical Analysis of Genomic Information : Long-Range Correlation in DNA Sequences
نویسندگان
چکیده
منابع مشابه
Statistical Analysis of Genomic Information: Various Periodicities in DNA Sequence
Atsushi Fukushima1 Makoto Kinouchi3,5 [email protected] [email protected] Yoshihiro Kudo3 Shigehiko Kanaya2,5 [email protected] [email protected] Hirotada Mori2,5 Toshimichi Ikemura4 [email protected] [email protected] 1 Graduate School of Biological Sciences, Nara Institute of Science and Technology, 8916-5 Takayama, Ikoma, Nara 630-...
متن کاملCharacterizing long-range correlations in DNA sequences from wavelet analysis.
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متن کاملLong range correlations in DNA sequences
The so called long range correlation properties of DNA sequences are studied using the variance analyses of the density distribution of a single or a group of nucleotides in a model independent way. This new method which was suggested earlier has been applied to extract slope parameters that characterize the correlation properties for several intron containing and intron less DNA sequences. An ...
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In this paper, we review the literature on statistical long-range correlation in DNA sequences. We examine the current evidence for these correlations, and conclude that a mixture of many length scales (including some relatively long ones) in DNA sequences is responsible for the observed 1=f -like spectral component. We note the complexity of the correlation structure in DNA sequences. The obse...
متن کاملComparison of period-3 correlation amplitudes in genomic DNA sequences.
Period-3 oscillations in genome composition can be detected through correlation functions. Since these oscillations are closely related to the genetic code structure, we developed methods for quantitative comparison of genomic and exonic oscillation amplitudes and decay. In contrast to genomic correlations, exonic period-3 oscillation amplitudes are persistent. A model postulating an uncorrelat...
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ژورنال
عنوان ژورنال: Seibutsu Butsuri
سال: 2000
ISSN: 0582-4052,1347-4219
DOI: 10.2142/biophys.40.s68_1